PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_D01G2011

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

bZIP

Protein Properties

Length: 422aa MW: 45967.5 Da PI: 8.9229

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_D01G2011	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48	2.7e-15	337	385	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsR+RK+a++ eLe + +L++eN+ Lk+ l el+ Gh_D01G2011 337 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLKQENTHLKQALVELE 385 79****************************************9998876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.1E-12	333	394	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.519	335	387	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.4E-12	337	389	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.2E-14	337	390	No hit	No description
CDD	cd14707	1.37E-23	337	391	No hit	No description
SuperFamily	SSF57959	3.75E-10	337	386	No hit	No description
PROSITE pattern	PS00036	0	340	355	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence Send to blast
MVVEDSEVGE VESTLKEVDQ QLKNHPLSAL GRQSSIYSLT LDEFQHTLCG KNFGSMNMDE 60 FLTSIWNAEE NQATNSINNN HHNNGVNEQV SNHVNLSLNE TASSKGVARQ SSLPRQGSLS 120 LPAPLCRKTV DEVWSEIHKV QQGQGQSNNS NVQNAENTST RQPTFGEMTL EDFLVKAGVV 180 REPCVPPAVP PHSQHQQQFG LHQASNNPAV GPSFVPRPIM GMGGSGGFGG STYQTMPPSG 240 VLGDSSRYLN DGKGGGGYQP AAAPPSTAIC YNGKVGAAGG FGPGQAMGVV SPISPVSPDG 300 ICTNQVDNAA TQFGIEIGGL RGRKRIIDGP IEKVVERRQR RMIKNRESAA RSRARKQAYT 360 VELEAELNQL KQENTHLKQA LVELERKRKQ QYFEEWSMKT QTKAQKAKEK LRVMRRNLSG 420 PL

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence Send to blast

MVVEDSEVGE VESTLKEVDQ QLKNHPLSAL GRQSSIYSLT LDEFQHTLCG KNFGSMNMDE  60
FLTSIWNAEE NQATNSINNN HHNNGVNEQV SNHVNLSLNE TASSKGVARQ SSLPRQGSLS  120
LPAPLCRKTV DEVWSEIHKV QQGQGQSNNS NVQNAENTST RQPTFGEMTL EDFLVKAGVV  180
REPCVPPAVP PHSQHQQQFG LHQASNNPAV GPSFVPRPIM GMGGSGGFGG STYQTMPPSG  240
VLGDSSRYLN DGKGGGGYQP AAAPPSTAIC YNGKVGAAGG FGPGQAMGVV SPISPVSPDG  300
ICTNQVDNAA TQFGIEIGGL RGRKRIIDGP IEKVVERRQR RMIKNRESAA RSRARKQAYT  360
VELEAELNQL KQENTHLKQA LVELERKRKQ QYFEEWSMKT QTKAQKAKEK LRVMRRNLSG  420
PL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012468185.1	0.0	PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like isoform X2
Swissprot	Q9SJN0	1e-126	ABI5_ARATH; Protein ABSCISIC ACID-INSENSITIVE 5
TrEMBL	A0A0D2QI93	0.0	A0A0D2QI93_G
STRING	VIT_08s0007g03420.t01	1e-145	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM9201	25	36

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	1e-109	bZIP family protein